BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H12LP1|AL430140
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1430 1711 0.0
>3x_Contig1430
Length = 7411
Score = 1711 bits (861), Expect = 0.0
Identities = 862/863 (99%)
Strand = Plus / Plus
Query: 3 tcctacttaggaaggatgagtttgcgagggacaagaaaatgttcttcacggtcttgaatc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5581 tcctacttaggaaggatgagtttgcgagggacaagaaaatgttcttcacggtcttgaatc 5640
Query: 63 accaaaactcgagtgagcaatccaacaaacctcgaagaagaatcaagaagagagataaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5641 accaaaactcgagtgagcaatccaacaaacctcgaagaagaatcaagaagagagataaga 5700
Query: 123 acaacaataaaaatatagtttcactaaatattgactcggattatggacctggagacttgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5701 acaacaataaaaatatagtttcactaaatattgactcggattatggacctggagacttgg 5760
Query: 183 attgaattcgtttaatctcatcaaacatgacatccataatctcgagcatcaaactaacat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5761 attgaattcgtttaatctcatcaaacatgacatccataatctcgagcatcaaactaacat 5820
Query: 243 ttaaatactcgttctgtagcattgaatgtaatctatatcctgcattgctcgcatacattg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 ttaaatactcgttctgtagcattgaatgtaatctatatcctgcattgctcgcatacattg 5880
Query: 303 tgccgaccactttcccgcaagtctctaccataaacctttcaagcatcgcctgcgattctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 tgccgaccactttcccgcaagtctctaccataaacctttcaagcatcgcctgcgattctg 5940
Query: 363 tactggttcggataatttcaccttcggtcctggctgatggctgtggaatgctgctgctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 tactggttcggataatttcaccttcggtcctggctgatggctgtggaatgctgctgctct 6000
Query: 423 tgaagaatatatcatctacccaaagtatggaattaagtttagagataaggagtgttactt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6001 tgaagaatatatcatctacccaaagtatggaattaagtttagagataaggagtgttactt 6060
Query: 483 tctctggtgatctgattcgttgtataacatctttgatatatttctcaatagtgctaccca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6061 tctctggtgatctgattcgttgtataacatctttgatatatttctcaatagtgctaccca 6120
Query: 543 ataatctttgtaatacaactatgatagcccttcctcttagccaaccggtattggactggt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6121 ataatctttgtaatacaactatgatagcccttcctcttagccaaccggtattggactggt 6180
Query: 603 ttagagcaaaaaaagaaatgaacaactcacatatgggtttcactaaggttcctgtattgt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6181 ttagagcaaaaaaagaaatgaacaactcacatatgggtttcactaaggttcctgtattgt 6240
Query: 663 tgctaccatttgctcccgaatggraatttctctcgtcctcaaagaaatctaattcatctg 722
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6241 tgctaccatttgctcccgaatggaaatttctctcgtcctcaaagaaatctaattcatctg 6300
Query: 723 agaaacttttgggatcatcaaatctccctgctgatacatttgtaacttctccaacggtgt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6301 agaaacttttgggatcatcaaatctccctgctgatacatttgtaacttctccaacggtgt 6360
Query: 783 tgtccgtctttaaaagaaccattgatcttctcttatcctcaacatcttcttccaaattct 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6361 tgtccgtctttaaaagaaccattgatcttctcttatcctcaacatcttcttccaaattct 6420
Query: 843 ctttaaccttaaaagtgttggaa 865
|||||||||||||||||||||||
Sbjct: 6421 ctttaaccttaaaagtgttggaa 6443
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7464
Number of Sequences: 1807
Number of extensions: 7464
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)